Insertion junction: CLIP2.008194_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008194
Chromosome:chromosome 6
Location:798624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g255100 (1 of 4) IPR000533 - Tropomyosin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCAGCCGGGCAGCACCTGCTTCAGCTCATGCCATGCTGGGGCCCCCT
Internal bar code:TAGCCGTTCAGGAATTTTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:401
LEAP-Seq percent confirming:2.27273
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTCCCATTGCTCATGTGT
Suggested primer 2:CGGCGCACATGTGTTCATAG