Insertion junction: CLIP2.008200_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008200
Chromosome:chromosome 16
Location:5547915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g681850 (1 of 2) 2.4.2.9//2.7.1.48 - Uracil phosphoribosyltransferase / UMP pyrophosphorylase // Uridine kinase / Uridine monophosphokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTATAGTATCAGTTGGTATTGTGTGCAATGCGCTGCGGTGTGGGTGCGA
Internal bar code:ACGGTGGTCGGATTACACTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:731
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCACGTAGGTCTGTTGCC
Suggested primer 2:GGCATGACACACACACACAC