Insertion junction: CLIP2.008205_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008205
Chromosome:chromosome 13
Location:4830315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605000 (1 of 107) IPR000719//IPR002290//IPR011009//IPR020635 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTACCATTTTATCAAAGTTTACCGAGGTTTTACCGATCAGCCAACCCA
Internal bar code:AATCTCGAGTGCGGCGGCGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1756
LEAP-Seq percent confirming:64.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCAATCAAGCAGGCGAG
Suggested primer 2:GTACTTCACCTCGTGCCCAA