Insertion junction: CLIP2.008215_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008215
Chromosome:chromosome 11
Location:2403160
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095125 (1 of 1) IPR000104//IPR000408//IPR009091 - Antifreeze protein, type I // Regulator of chromosome condensation, RCC1 // Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAAATGACCCGGTTTAGGTGTGTATGTCAGTATGTGTAGGTGTATGTGT
Internal bar code:CGACGTTCGGCGTGAATGATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:365
LEAP-Seq percent confirming:47.8261
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGCTGCACATCACACAAA
Suggested primer 2:GCTGTGTATTGATGGCTGCG