Insertion junction: CLIP2.008216_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008216
Chromosome:chromosome 1
Location:6890022
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g049300 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGATGCCGCAGTACTCGCAGCAGCAGCAGCAGCAGCAGCAGCAGGCGA
Internal bar code:GAGGGCCTTTGTTGCTATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1051
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTGCTTTGATGCAGGCG
Suggested primer 2:AGGGATGATCGGGTCAGTCA