Insertion junction: CLIP2.008230_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008230
Chromosome:chromosome 7
Location:6137561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355800 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTCTCATAACTCCGATTTTCATTGCGGTATGCCCCCTCCTGTGTATGT
Internal bar code:TGAGTCGGATGTCAACTATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2280
LEAP-Seq percent confirming:98.4615
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAGGCATGGTATTGCGC
Suggested primer 2:CTGCCCCACAATGACGAGAT