Insertion junction: CLIP2.008233_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008233
Chromosome:chromosome 12
Location:9335102
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541904 (1 of 1) PF08755//PF13369 - Hemimethylated DNA-binding protein YccV like (YccV-like) // Transglutaminase-like superfamily (Transglut_core2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGGCGTGCCAACCTGCTGCTGCGGCGGCGTGGGTCCTGGTCACAGTT
Internal bar code:GCCGTATAGGCGGTGATCGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:784
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGAGGTCGATAAAGGGCG
Suggested primer 2:CACACACACACACACACACC