Insertion junction: CLIP2.008238_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008238
Chromosome:chromosome 4
Location:2901473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g224500 (1 of 1) 3.6.3.17//3.6.3.44 - Monosaccharide-transporting ATPase // Xenobiotic-transporting ATPase / Steroid-transporting ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTTAAATGGGTAGTGCCCGACCTATAGCCGGAGTTTGGGGACCGGACG
Internal bar code:AATTCGTGGAGTCCCGTTCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3947
LEAP-Seq percent confirming:99.0909
LEAP-Seq n confirming:109
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:110

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGATAGCAAACCCGCCA
Suggested primer 2:CACAACCAGCTGACAACACG