Insertion junction: CLIP2.008245_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008245
Chromosome:chromosome 2
Location:4167628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103900 MAPKKK11 (1 of 112) 2.7.11.25 - Mitogen-activated protein kinase kinase kinase / MLTK; Mitogen-Activated Protein Kinase Kinase Kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAGGATCCAACAATGTGCGCACGCGCTGCCGAGTTACGCAGAGAGCAG
Internal bar code:AACGCGCAAGCGCCCCATGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:475
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACATCGTGTGCATACGCTG
Suggested primer 2:AACTCGTCACGCTTGTTTGC