Insertion junction: CLIP2.008249_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008249
Chromosome:chromosome 11
Location:1343756
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801254 CDS
lncRNA_TCONS_00185693 CDS
lncRNA_TCONS_00186621 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCCAGGCTTGGAAAGATTGCACAGGTGGGCCGTGGCCAATGGCGTTG
Internal bar code:CAACTCCGAAATGGCGTCAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2149
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:83

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCCCGAAATTCCCACCC
Suggested primer 2:CAACTGGGCTGTCAACAAGC