Insertion junction: CLIP2.008267_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008267
Chromosome:chromosome 13
Location:4030522
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g590600 PDE32 (1 of 1) IPR000104//IPR002073//IPR023088 - Antifreeze protein, type I // 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain // 3'5'-cyclic nucleotide phosphodiesterase; 3'%252C5'-cyclic-nucleotide phosphodiesterase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCTTCTCCTCCGCCTTGTCCAGCACAAACTTGTCGAACTGGGCCTTG
Internal bar code:TGGATTTGTAGGGTTTATACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4561
LEAP-Seq percent confirming:96.5217
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:115

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCACCTGTGTCTACCGTC
Suggested primer 2:GCACTTGCCTGGCTAACCTA