Insertion junction: CLIP2.008275_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008275
Chromosome:chromosome 13
Location:2203864
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578100 NUP205 (1 of 1) K14310 - nuclear pore complex protein Nup205 (NUP205, NUP192); Nucleoporin 205 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACGCCGACGCGGTTTTTCCCACGCGGGCAGCCACTATGAATATGAG
Internal bar code:GGGTAATCCTCCGCCACGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:666
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCAAGGATGGCCAGTTG
Suggested primer 2:TTCCCGGATAGGAGGCTTGA