Insertion junction: CLIP2.008280_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.008280
Chromosome:chromosome 3
Location:6441787
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g193200 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCACTGGGATGGTCAAGCTGAGAGAGAGGGAAGGCCGGGGAGCACGGCG
Internal bar code:GGAGTTAACTAAAAGCGAGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2450
LEAP-Seq percent confirming:97.9167
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTAGCTACTCGCGTACAG
Suggested primer 2:GTTGACCGGTGCTAGGTTCA