Insertion junction: CLIP2.008290_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008290
Chromosome:chromosome 2
Location:5014214
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110800 NRT2F Nitrate/nitrite transporter; (1 of 4) K02575 - MFS transporter, NNP family, nitrate/nitrite transporter (NRT, narK, nrtP, nasA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTACGAGAGCGAACGAGAGCGAACGAATGCGCGGGGAAACGATGTAAAG
Internal bar code:AGAAAGAGGCCAGGCTTCACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGATGGTCCCACTCGTG
Suggested primer 2:TACACACAGAAGTCCGTGGC