Insertion junction: CLIP2.008296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008296
Chromosome:chromosome 2
Location:1216169
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081700 PHC66 Pherophorin-chlamydomonas homolog 66; (1 of 1) IPR003882//IPR005404//IPR024616 - Pistil-specific extensin-like protein // Potassium channel, voltage dependent, Kv3.3 // Pherophorin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAGTGAACTTCCGGCGGCGCCGTGGGCAAACCAACGCGAGGCGCAGCC
Internal bar code:CTTTCTCTTACAAAAGCCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1815
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCGAACCCAGTATGCACA
Suggested primer 2:GAGACCGTGTTTTGCACCAC