Insertion junction: CLIP2.008299_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008299
Chromosome:chromosome 2
Location:4953734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g110300 DNJ25 (1 of 62) PF00226 - DnaJ domain (DnaJ); DnaJ-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGGTATGGCACCCGGACCGCCACGGTGGCGCGGAGAACGCAAAACG
Internal bar code:GAGGGTCCTTCTGGGCACTACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3137
LEAP-Seq percent confirming:97.561
LEAP-Seq n confirming:120
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:123

Suggested primers for confirmation by PCR

Suggested primer 1:TAGTCAAAAGCGCCTTCCGT
Suggested primer 2:GTGAGTGTGTTCGTTTGCCC