Insertion junction: CLIP2.008302_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008302
Chromosome:chromosome 11
Location:823263
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467639 (1 of 1) PF04910 - Transcriptional repressor TCF25 (Tcf25) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGGGTGGAGGCCATGTGGACTGTGCGGGCGCACGGGCGCTGGGTAC
Internal bar code:TTAATAAAACAGTGTCGTTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2834
LEAP-Seq percent confirming:95.8824
LEAP-Seq n confirming:163
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:170

Suggested primers for confirmation by PCR

Suggested primer 1:AGATTTAGCCCACAGCCCAC
Suggested primer 2:CCTCTGTGCTGTGTGTGGAT