Insertion junction: CLIP2.008303_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008303
Chromosome:chromosome 15
Location:320025
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635250 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCCCGGCCAGGGCTGGTAAGCGAGGTCAGGCAGGGCATTCCAATCGT
Internal bar code:GCATCGCGATGGCTTCAAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:937
LEAP-Seq percent confirming:25.2632
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:71
LEAP-Seq n unique pos:95

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCACTGCCGCCTTCTACA
Suggested primer 2:AGGCTCTCCAACAACTCTGC