Insertion junction: CLIP2.008307_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008307
Chromosome:chromosome 1
Location:5404203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038100 BES1 (1 of 10) PF01062 - Bestrophin, RFP-TM, chloride channel (Bestrophin); putative chloride channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGTGCTGGCGTGTCAGGGTCGCAAGGCGCGTGCTCCGAACAAGTCCGA
Internal bar code:GGCGTTAAACTAACTATTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:955
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTGACCCTCAACCCTGAACC
Suggested primer 2:ATCGTAAGTAGTGCTCGCGG