Insertion junction: CLIP2.008320_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008320
Chromosome:chromosome 3
Location:1429269
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151000 SEX4,DSP8 Laforin glucan phosphatase, chloroplastic; (1 of 1) PTHR10343//PTHR10343:SF58 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGTGGTGGCGGCGGCGTCGTCTGCTGCGAGGGGCGGTGGGTGGTGATG
Internal bar code:CCCGAAGATGTCTCTGCCCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:3943
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:101

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCATCAAGTCGTGGTCT
Suggested primer 2:TGGCTTGCTTTGGTTCATGC