Insertion junction: CLIP2.008320_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008320
Chromosome:chromosome 3
Location:1429271
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g151000 SEX4,DSP8 Laforin glucan phosphatase, chloroplastic; (1 of 1) PTHR10343//PTHR10343:SF58 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT // PHOSPHOGLUCAN PHOSPHATASE DSP4, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCCACCGCCGCCACCTCCGCCGCTACGGAGCCCACCACGGATGAGGAG
Internal bar code:TTACGATCAATGTCGTGTATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:934
LEAP-Seq percent confirming:86.2069
LEAP-Seq n confirming:100
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTTGCTTTGGTTCATGC
Suggested primer 2:CTGCCATCAAGTCGTGGTCT