Insertion junction: CLIP2.008326_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008326
Chromosome:chromosome 3
Location:7466903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGCAGGCGGTGGAGCAGGCGGCAAAGCAGCAGAAAGCGACAACTAAG
Internal bar code:GAACAGAGTTCCGGCCGACTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGAAAACTGTCGGTCCA
Suggested primer 2:TGAATTCGCCACTCGCTCTT