Insertion junction: CLIP2.008330_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008330
Chromosome:chromosome 2
Location:2857918
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g094750 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTTCAACGTTGGACGTTTCCCTGCATTCAGGTGCTTCTTAGCAGCAG
Internal bar code:AGGTTCCGATAGGGGAACCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2421
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGAAACACCGCAAACCC
Suggested primer 2:TGTGTCATCGTCGACTGCAA