Insertion junction: CLIP2.008330_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008330
Chromosome:chromosome 4
Location:3865288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g230340 FAP206 (1 of 1) PTHR21442:SF0 - UPF0704 PROTEIN C6ORF165; Flagellar Associated Protein 206 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCTGTGCAGATGCGCGCCAGCTCCGCCAGCTGCGTCAGCCGCTCGC
Internal bar code:GTTGTGTTTTGGTTTACATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGGCGTTAGTTGCAAGT
Suggested primer 2:GTGTGTGTGTGTCTGTGTGC