Insertion junction: CLIP2.008331_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008331
Chromosome:chromosome 9
Location:2560725
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392652 (1 of 1) 1.5.1.22 - Strombine dehydrogenase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCTGCTGCGGCGGCTGTTACTGATCGTGACGACTGTGCCGCCGAAGTT
Internal bar code:TAGTAATCGAATACGACGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1608
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCTGTCTGCGCGTGTTTACT
Suggested primer 2:CGGGATTGCAACTGTTGTCG