Insertion junction: CLIP2.008340_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008340
Chromosome:chromosome 3
Location:8230018
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200100 PUX10 Plant UBX domain-containing protein 10; (1 of 1) K18726 - FAS-associated factor 2 (FAF2, UBXD8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGACTGGGATTAGCACCAGTGGCTAAGGTACTTGCACGTGTGCTCGTA
Internal bar code:ATCTCCGGTTCTGCTTCTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2921
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCTGACCTCGGCCTTCT
Suggested primer 2:CATTCATTGTGAGGCTCGCG