Insertion junction: CLIP2.008342_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008342
Chromosome:chromosome 5
Location:2227085
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800552 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCTTTCACGTGTGGCCCTGTCACCCCTCAGCCCAGGTTTTGAGCAGGGA
Internal bar code:GGAACGCGCGCCCTCGGATGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1583
LEAP-Seq percent confirming:88.5057
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTGTTTAGGGGATGCGG
Suggested primer 2:CGCATGTTCACAGTGTTGCA