Insertion junction: CLIP2.008358_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008358
Chromosome:chromosome 1
Location:5112819
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTACAGGCAAAAGTGGAAGCATGGGCATAGGGCGGCAGCGAGGAAGTGT
Internal bar code:ACGTGCTGGCTCACAACAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:5385
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGAAAGGAAAGACCCGA
Suggested primer 2:GTGAAGCTGTTCTCGGGGAA