Insertion junction: CLIP2.008358_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008358
Chromosome:chromosome 1
Location:5112839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g035700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCGGGAATCCGGGAATTAGGCGTGCTGGGTAAACGTTGTTTAGCGCGC
Internal bar code:TCATGATATGTGTCCCCATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1630
LEAP-Seq percent confirming:42.8571
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAAGCTGTTCTCGGGGAA
Suggested primer 2:GCCAGAAAGGAAAGACCCGA