Insertion junction: CLIP2.008375_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008375
Chromosome:chromosome 3
Location:8050066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGAGGTGTTGCCTGGGAATGGCTACCTGGTATGTTACGTCAGGCTAGC
Internal bar code:AGGGCGGTATCGCGATACGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1576
LEAP-Seq percent confirming:51.7241
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:TAACCAACGGACATTCGCCA
Suggested primer 2:CGTTTGTGGTGTGCAGTCTG