Insertion junction: CLIP2.008379_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008379
Chromosome:chromosome 12
Location:2188885
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509200 (1 of 1) PF00722//PF03935 - Glycosyl hydrolases family 16 (Glyco_hydro_16) // Beta-glucan synthesis-associated protein (SKN1) (SKN1); weakly Similar to Beta-Glucan Synthesis-Associated intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTTCGGACCAGGAGAACCTGACCCTAAGCAGGCAGGCAGATACTGCC
Internal bar code:TTTGCTGTTTCAGAAACATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1083
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:19
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCACGTTGGGCAACTTGG
Suggested primer 2:TACCTCCATGGATGAGGGCA