Insertion junction: CLIP2.008380_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008380
Chromosome:chromosome 3
Location:1346752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150700 (1 of 2) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCTAAGCACAAGACGGCTTGCAAGGCCGCACGCAAGGCCGCGGCCGC
Internal bar code:GCTAAGGTATAGTGGCGGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:68
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTAGAGAGTGAGGGCAGG
Suggested primer 2:GCGCCAATGACATGCTGTAG