Insertion junction: CLIP2.008380_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008380
Chromosome:chromosome 3
Location:1346838
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g150700 (1 of 2) PTHR22904:SF312 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCCAACTGGCAGCCCGTAGCGCCTGTTTCCCTCGATGTTCATCCAC
Internal bar code:GCTAAGGTATAGTGGCGGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1404
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCAATGACATGCTGTAG
Suggested primer 2:AGGTAGAGAGTGAGGGCAGG