Insertion junction: CLIP2.008386_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008386
Chromosome:chromosome 17
Location:3051403
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720150 (1 of 1) IPR000104//IPR008752 - Antifreeze protein, type I // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCTGAACAGAAACGCGTCGAAAGGACTGCTTACACACTCGGCATATGT
Internal bar code:CGTGGGGTCTGCACAGGTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTGCAGCAAGTAAAAGG
Suggested primer 2:TGAGGCGCTCTAAAGGTTGG