Insertion junction: CLIP2.008386_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008386
Chromosome:chromosome 17
Location:3051412
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720150 (1 of 1) IPR000104//IPR008752 - Antifreeze protein, type I // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAGGATAGCAGACAAACAGGAAGAAACAATGAAAGCGGGTTGTCATA
Internal bar code:CGTGGGGTCTGCACAGGTTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2813
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:85

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGCGCTCTAAAGGTTGG
Suggested primer 2:CGGCTGCAGCAAGTAAAAGG