Insertion junction: CLIP2.008391_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008391
Chromosome:chromosome 14
Location:344043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g610050 (1 of 1) K15180 - negative elongation factor B (COBRA1, NELFB) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCCTCCCCTGCCCCTCAACCTCTCCCCGAGGATTCTTGCCAGAATTG
Internal bar code:AGATTGGATGGTGGAACTGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCTATGCCTGCTGTCTA
Suggested primer 2:CCGATCCTCAACGTCCTAGC