Insertion junction: CLIP2.008398_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008398
Chromosome:chromosome 3
Location:9071213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g202001 (1 of 7) IPR011989//IPR016024 - Armadillo-like helical // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCACCGCCCACACAGCCGACAGCACCCCCACCAGCCTGCCCACGCAC
Internal bar code:TGGGATGGTTAATACTACATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACCACTTCCTCGACCAC
Suggested primer 2:GACCGTATCACGTGGCTCAG