Insertion junction: CLIP2.008400_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.008400
Chromosome:chromosome 3
Location:5258072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182200 (1 of 1) IPR001054//IPR028082//IPR029787 - Adenylyl cyclase class-3/4/guanylyl cyclase // Periplasmic binding protein-like I // Nucleotide cyclase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTGGCTGAGTACGGCTTCATTGCAACTGTACAGCCTTTGACCGCAGC
Internal bar code:ACCTTAGTTCCTGTCCTGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1351
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTCGACACCTTCTACGGG
Suggested primer 2:GGTACTCTCCGTATGGTGCG