Insertion junction: CLIP2.008403_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008403
Chromosome:chromosome 2
Location:3195664
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800211 (1 of 3) IPR000104//IPR020846 - Antifreeze protein, type I // Major facilitator superfamily domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACACACCTCTGTCTCACGCGTAATATTTTCCTTCTGCTCTTTAACACA
Internal bar code:ACGCTTGATTTCCACAAAGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:58
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCCCCGCTTGTATCCTG
Suggested primer 2:GTCTAGTGGGTGTGGGTGTG