Insertion junction: CLIP2.008419_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008419
Chromosome:chromosome 11
Location:130939
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467537 PPR12 PentatricoPeptide Repeat protein 12 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGCAGGTCAGGGTTACGGCCGAGCGTGGGTTGGGTGAGGGCACATGC
Internal bar code:GTTTTCTACGGCCCAGCTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:5358
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGCCGCTAAGTAGTGAGG
Suggested primer 2:TTTGCCGCCCATTCAGTTTG