Insertion junction: CLIP2.008429_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.008429
Chromosome:chromosome 10
Location:1113989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425400 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTCAGTACGAGGCAGCCTCGAGGCTGCTTTGTGACAAGGCCATGCTCG
Internal bar code:TATTTTTCTACTCTCACGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCTCCTCTGTCTCCTCA
Suggested primer 2:CCGAGCTTCCAGACCATTGT