Insertion junction: CLIP2.008432_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008432
Chromosome:plastome
Location:12319
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802267 ChreCp005,2716979,tufA elongation factor 1-alpha; (1 of 1) PTHR23115//PTHR23115:SF146 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCAATGTCTTTTTTCTGTACACCACGAAGAAGAACACCTACGTTATCA
Internal bar code:TATTCGCCATTGCAGGGACGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1314
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATCACAGGTGCTGCACA
Suggested primer 2:CCAAAGGGGACGTCCGTTAA