Insertion junction: CLIP2.008439_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008439
Chromosome:chromosome 11
Location:2149936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467741 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGATGATGTGCTGCTGCTGTCGGACTTGGACTGGGAGGAACTGGAGGG
Internal bar code:AAGGTCCGTGCATGTCTTAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2739
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GAAAGGGATCCGAGGCTCAG
Suggested primer 2:CCGTGGATGAAGCAGACACT