Insertion junction: CLIP2.008439_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008439
Chromosome:chromosome 11
Location:2149957
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467741 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGACAGCCCTGCGAAGAGGCCGCGAGAGCTAGTAGCCCCAGCTGCCCTGC
Internal bar code:GGTTGTCATCGGTATGGTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:5139
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGGATGAAGCAGACACT
Suggested primer 2:GAAAGGGATCCGAGGCTCAG