Insertion junction: CLIP2.008443_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.008443
Chromosome:chromosome 17
Location:4586505
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g732050 AGE3 DNA repair glycosylase; (1 of 1) K10773 - endonuclease III (NTH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCAGCGCCAGGAGGAGGGGGCGAAGGGAGGCCGGGGCCAGACTCCACT
Internal bar code:GCTTCCAGAGACGCATTTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2738
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:135
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:135

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACGGAGGCATCGTGTAC
Suggested primer 2:TGACCTTGACGTCTGTGCTC