Insertion junction: CLIP2.008450_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.008450
Chromosome:chromosome 7
Location:5683679
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352800 (1 of 1) PTHR35460:SF1 - TRANSLATION ELONGATION FACTOR EF-1 ALPHA intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGTTACGGTGTCGCGTGCCACACAGCCAGCACAGAAAGACAAGCAGCA
Internal bar code:TTAGTCCATCGATAGGCTCCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCACATCATGGGGAAGG
Suggested primer 2:CATCCCCTGTGCCTCCAATT