Insertion junction: CLIP2.008452_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008452
Chromosome:chromosome 14
Location:2969555
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627500 (1 of 1) PTHR18937//PTHR18937:SF259 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCGTCTGTGAGGACACCGGGTATCCGGGTAGGTAGGTGGCGGGTAGAG
Internal bar code:GCTCCAGCAATCCGACATAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1671
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACGGACCCAGTAGGCT
Suggested primer 2:GTATCCACACACGCGCATTC