Insertion junction: CLIP2.008456_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.008456
Chromosome:chromosome 12
Location:2931235
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g502450 ELG8 (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase; Exostosin-like glycosyltransferase 8 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGGGTGGCGGGGCGGGCAGCGAAGGGGAGGGAGCGGTTGTATCAGGA
Internal bar code:TTCGTCAAGACCACCGGTCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:494
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCGGTTGGTGGTTTTCCTTC
Suggested primer 2:ACAGACTCATGGAGCACAGC