Insertion junction: CLIP2.008463_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.008463
Chromosome:chromosome 2
Location:569720
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076987 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCACGGTGTGCAGGTCCCACACGCTGTTGCCGCCGCAGCCCTGAGGCGA
Internal bar code:CTTAACTTTTGTAGCCGTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2475
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTCAGGGGTAGAGTCTCC
Suggested primer 2:TGCCGCCAGCTTTAGTACAA