Insertion junction: CLIP2.008463_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.008463
Chromosome:chromosome 2
Location:569722
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g076987 (1 of 10) PTHR31867//PTHR31867:SF1 - FAMILY NOT NAMED // EXPANSIN-A1-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGCAATGACGGGTGGAGCGACCAGTGGGTCTGCCTGGACCGCGTGCGG
Internal bar code:ATGGCGGAGTACAGTAGTTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2606
LEAP-Seq percent confirming:93.4211
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGCCAGCTTTAGTACAA
Suggested primer 2:ACGTCAGGGGTAGAGTCTCC